Category Archives: Microbiology Investigations

Traveling to Mexico? Here’s how to avoid food poisoning on vacation.

Food Poisoning News

The inexpensive food and delicious smells often tempt travelers to purchase food from the numerous street vendors. Before indulging, however, it is recommended to be vigilant of how ingredients are stored and how the raw meats are handled. Food that is cooked in front of the customer, rather than appearing to be pre-cooked, is a much safer option. When food, even if cooked, is left at room temperature too long, the dangers of cross-contamination and bacterial growth are much higher.

An easy rule to follow is also simply trusting your instincts and avoiding vendors whose food carts are untidy or produce rotten odors. Look for hand-sinks, access to water, or refrigeration units.

Ceviche is also a very common dish in Mexico. Raw fish is exponentially more likely to be contaminated than cooked fish, especially if it is not stored correctly. Travelers should be especially wary of eating ceviche in an area that is farther away from the coast where the fish have to be stored for longer periods of time.  In addition, all ceviche stands should have refrigeration units or copious amounts of ice.

Mexico also has a long history of unsafe drinking water – often the source of “traveler’s diarrhea.” It is generally recommended to not drink water straight from the tap or to use ice cubes made from tap water. Even if the water is purified at the source, the pipes that the water passes through may not be sanitary. Caution should also be exercised when purchasing fruit juices or horchata made with ap water.  Recommendation? Stay hydrated by drinking bottled drinks.

Travelers to Mexico will have a more enjoyable trip if they make wise and informed choices regarding the food they consume. But don’t leave home without anti-diarrheal medicine!

Research – How to deal with food poisoning while traveling—and how to avoid it altogether

National Geographic

Some countries have a reputation for putting travelers at a higher risk for gastrointestinal illnesses. But you can get sick from an improperly handled meal anywhere in the world.

Pad thai from a Bangkok street vendor or raw milk cheese from a bistro in France taste delicious in the moment. But for many travelers, the local dishes that make trips meaningful sometimes give them food poisoning—and the wrong sort of vacation memories.

By some metrics, gastrointestinal infections related to food or water affect 30 to 70 percent of all travelers during or immediately after their trips, according to a 2015 study in BMJ Clinical Evidence. Each year, one in six Americans and nearly one in 10 people worldwide suffer from such illnesses caused by bacteria (E. coli, salmonella, listeria), viruses (norovirus, hepatitis A), or parasites (giardiasis, roundworms, tapeworms).

Lower-income countries have a reputation for putting travelers at a higher risk for food poisoning, but people are just as likely to be sickened from an improperly handled meal in Italy or Australia—or from some sushi at their local supermarket.

Here’s why people get food poisoning, what to do if it strikes, and how to (maybe) prevent it, read at the link above.

USA – Outbreak Investigation of Listeria monocytogenes: Enoki Mushrooms (November 2022)

FDA

The US Food and Drug Administration (FDA), along with Centers for Disease Control and Prevention (CDC) as well as state and local partners, investigated an outbreak of Listeria monocytogenes infections linked to enoki mushrooms. FDA identified enoki mushrooms distributed by Utopia Foods, Inc. of Glendale, New York, and imported from China, and enoki mushrooms labeled as “Producer: Shandong Youhe Biotechnology, Co.,” with an address in China and “Distributed By: Sun Hong Foods, Inc.” as likely sources of illnesses in this outbreak. Enoki mushrooms are long thin white mushrooms, usually sold in clusters. They are especially popular in East Asian cuisine and are also known as enokitake, golden needle mushrooms, futu, seafood mushrooms, or lily mushrooms.

As of April 7, 2023, CDC reports this outbreak is over. Five people in four states (CA, MI, NJ, NV) were sickened with five people reporting hospitalization. There was one pregnancy-associated illness and no reported deaths.

During this investigation, FDA leveraged ongoing surveillance sampling efforts. Several import and retail samples were collected and tested by FDA and/or state and local partners. Laboratory results indicated that many enoki products sampled were contaminated with Listeria. On January 17, 2023, FDA reported a positive import sample of enoki mushrooms that matched both outbreak strains and resulted in a voluntary recall expansion from Utopia Foods, Inc.

Additional sample collection and analysis conducted by the Maryland Department of Health identified both outbreak strains of Listeria in two product samples of enoki mushrooms. The products that tested positive were sold in a 7.05-oz (200g) clear plastic package with a brown and green label and included a label on the back of the package that states: “Producer: Shandong Youhe Biotechnology Co.,” with an address in China, and “Distributed By: Sun Hong Foods, Inc.”

While the outbreak has ended, FDA continues to assess the risk of Listeria contamination in enoki mushrooms.

Further, FDA has added enoki mushrooms from China to a country wide import alert (Import Alert (IA) #25-21). As stated in the Import Alert, FDA Import Divisions may subject shipments of enoki mushrooms from Republic of Korea and China to Detention Without Physical Examination (DWPE). FDA import alerts inform the FDA’s field staff and the public that the agency has enough evidence to allow for DWPE of products that appear to be in violation of the FDA’s laws and regulations. DWPE helps to prevent potentially violative products from being distributed in the United States.

In addition, after the 2020 outbreak linked to enoki mushrooms, FDA began implementing a Strategy to Help Prevent Listeriosis and Salmonellosis Outbreaks Associated with Imported Enoki and Imported Wood Ear Mushrooms, to protect public health. This prevention strategy is an affirmative, deliberate approach undertaken by FDA and stakeholders to help limit or prevent future outbreaks linked to certain FDA-regulated foods.

Recommendation

Although this outbreak investigation has ended, FDA and CDC are working to better understand the risk of Listeria monocytogenes contamination in enoki mushrooms.

CDC and FDA advise people who are pregnant, aged 65 or older, or have a weakened immune system to cook enoki mushrooms thoroughly, and to: 

  • Avoid eating enoki mushrooms raw. 
  • Keep raw enoki mushrooms separate from foods that won’t be cooked.
  • Wash your hands, items, and surfaces that have touched raw enoki mushrooms.

Restaurants should cook enoki mushrooms thoroughly before serving to customers, follow FDA’s safe handling and cleaning advice, and use extra vigilance in cleaning and sanitizing any surfaces and containers that may have come in contact with these products.

This advice is based on the following information:

  • Two recent multistate Listeria outbreaks have been linked to enoki mushrooms: This outbreak, and the first known Listeria outbreak in the United States linked to enoki mushrooms in 2020.
  • During this investigation, FDA leveraged ongoing surveillance sampling efforts. Several import and retail samples were collected and tested by FDA and/or state and local partners and many were contaminated with Listeria. Some samples contained high levels of the bacteria.
  • More than 20 recalls of enoki mushrooms due to potential Listeria contamination have been conducted since 2020.

Research – Human and animal botulism surveillance in France from 2008 to 2019

Frontiers in Microbiology

Botulism is a human and animal neurological disease caused by the action of bacterial neurotoxins (botulinum toxins) produced by bacteria from the genus Clostridium. This disease induces flaccid paralysis that can result in respiratory paralysis and heart failure. Due to its serious potential impact on public health, botulism is a closely monitored notifiable disease in France through a case-based passive surveillance system. In humans, this disease is rare, with an average of 10 outbreaks reported each year, mainly due to the consumption of contaminated foods. Type B and to a lesser extend type A are responsible for the majority of cases of foodborne botulism. Each year, an average of 30 outbreaks are recorded on poultry farms, about 20 cases in wild birds and about 10 outbreaks in cattle, involving a large number of animals. Mosaic forms C/D and D/C in birds and cattle, respectively, are the predominant types in animals in France. Types C and D have also been observed to a lesser extent in animals. With the exception of botulinum toxin E, which was exceptionally detected throughout the period in wild birds, the types of botulism found in animal outbreaks are different from those identified in human outbreaks over the last ten years in France and no human botulism outbreaks investigated have been linked to animal botulism. In line with the One Health concept, we present the first integrative approach to the routine surveillance of botulism in humans and animals in France.

Research – Bacterial signaling across biofilm affected by surface structure

Science Daily

Bacteria are also able to communicate with each other through chemical signals, a behavior known as quorum signaling (QS). These chemical signals spread through a biofilm that colonies of bacteria form after they reach a certain density, and are used to help the colonies scavenge food, as well as defend against threats, like antibiotics. Researchers examined how different structures affects biofilm growth and QS by the bacteria in the presence of antibiotics. They found structure does have an effect on QS in some strains of the bacteria.

Research – Microbiological Risk Assessment in Foods: Background and Tools, with a Focus on Risk Ranger

MDPI

Risk assessment is an important phase of the food production path; it is strictly related to the processing chain as a necessary step for safe foods. This paper represents a contribution to understanding what is and how risk assessment could be conducted; it aims to provide some information on the structure of risk assessment, the tools for its identification and measurement and the importance of risk assessment for correct communication. In this context, after a focus on the background and on some commonly used tools (Risk Ranger, FDA-iRisk, decision tree, among others), the paper describes how to perform risk assessment through three case studies: lettuce (for Listeria monocytogenes), chicken salad (for Escherichia coli), and fresh egg pasta (for Staphylococcus aureus) in the first step, and then a comparison of risk for chicken salad contaminated by different pathogens (E. coli O157:H7, Campylobacter spp. and Salmonella sp.). As a final step, a critical evaluation of Risk Ranger was carried out, pointing out its pros and cons.

Research – Evaluation of peroxyacetic acid, liquid buffered vinegar, and cultured dextrose fermentate as potential antimicrobial interventions for raw chicken livers

Wiley Online

This study aimed to evaluate the use of peroxyacetic acid (PAA), buffered vinegar (BV), and cultured dextrose fermentate (CDF) to reduce Salmonella on artificially inoculated raw chicken livers, one of the most consumed offal around the world. Samples were inoculated with a 5-strain cocktail of poultry-borne Salmonella to obtain 106 CFU/g and immersed for 90 s with agitation in one of the following treatments: distilled water (control), 450 ppm PAA, 2.0% (w/v) BV, or 1.5% (w/v) CDF, prior to storing at 4°C. Salmonella was enumerated on XLD agar and monitored for 14 days. Data were analyzed using analysis of covariance. After immersion, there was a significant Salmonella reduction (p < .05) with all treatments, including the control. PAA resulted in the greatest numerical reduction at 0.65 ± 0.12 log; however, there were no significant differences in the reductions among all other treatments (p > .05). After 14 days, higher numerical reductions were observed for PAA, but only when compared to CDF. Although similar reductions (p > .05) were noted after 14 days except for CDF, Salmonella counts were lowest in all timepoints when PAA was used. PAA and CDF inhibited the growth of aerobic bacteria until day 3 while BV inhibited the growth up to 7 days. Regarding objective color, chicken livers immersed in PAA became lighter, but the difference was not sustained over time. No differences were observed in redness or yellowness values across any treatments.

Research – Special Issue: Coffee, Fungi, Mycotoxins, and Climate Change

MDPI

Coffee is very lucrative and enjoyed by many. It is a major cash crop, especially for countries without many alternative sources of income. However, production is threatened by climate change, a phenomenon that is now universally accepted as occurring and represents a major threat to societies and industry worldwide. Paterson and Lima [1] expressed great concern in 2010 about the lack of methods to combat climate change. Thirteen years later, there has been little tangible action to reduce climate change, despite many warm words about what will be done “sometime in the future”.
It is apposite to consider what would be the effect of climate change on coffee, particularly in relation to spoilage fungi and the production of mycotoxins. Fungi already cause considerable damage to coffee and mycotoxins have highly significant consequences on human and animal health. The commodity can be rejected by authorities when the concentrations of ochratoxin A (OTA) are too high.
We were hoping for more than four papers on the subject, but were pleased that the quality was so high of those we did receive. Gratitude is extended to Naresh Magan’s group for contributing two papers [2,3], both of which present novel data. Akbar et al. [2] have already been cited 15 times (Scopus (18 February 2023)), indicating the high relevance of their work. The growth and OTA production of Aspergillus westerdijkiae were tested in relation to, for example, water activity, temperature and CO2 in media and beans. Interestingly, in green coffee-based media, OTA production was optimum at 0.98–0.95 aw and 30 °C. However, in roasted coffee-based media, very little OTA was produced. In stored green coffee beans, optimum OTA was produced at 0.95–0.97 aw/30 °C.
The objective of Akbar et al. [3] (five Scopus citations ((18 February 2023))) was to examine the effect of treatment of coffee beans with gaseous ozone (O3) for the control of ochratoxigenic fungi and OTA contamination during storage. The paper revealed that, inter alia, it is unlikely that fungi and the OTA contamination of stored coffee beans would be controlled even with high O3 concentrations under wetter conditions.
Our first review on the topic came from Brazil [4], which already has six citations (Scopus ((18 February 2023)). Brazil produces the most coffee globally and we were especially pleased to receive this paper. Temperatures in coffee-producing municipalities in Brazil have increased by about 0.25 °C per decade and annual precipitation has decreased. Therefore, the coffee sector will face serious challenges in the next few decades and the impacts of climate change directly affect coffee mycobiota. Aflatoxins may become dominant with climate change, promoting greater food insecurity in coffee production. Closer attention by authorities is fundamental to stimulate the displacement of areas currently apt for coffee production, that will deteriorate in the future to novel climate zones with suitable climates. This will ameliorate the scarcity of coffee on the world market in the future.
Adhikari et al. [5] (13 citations Scopus ((18 February 2023))) reviewed how (a) suitable areas for coffee cultivation and (b) the toxigenic fungal taxa belonging to AspergillusPenicillium, and Fusarium will be affected due to climate change. Studies predict that suitable coffee cultivation areas could drop by 50%. Increased temperatures will see an overall increase in mycotoxin production such as aflatoxins, particularly by A. flavus, which grows at higher temperatures. Information regarding climate change parameters and mycotoxin concentrations in real coffee samples is provided. Modelling of future changes in coffee cultivation is also required. Indications show that climate change will result in an increase in mycotoxin contamination.
The current author expresses his appreciation to all the authors of this Special Issue and trusts the papers will be of considerable use to workers in the field. He also hopes that very large advances in reducing climate change will occur in the next 13 years, unlike the previous 13.

Research – German data shows Listeria in fish is still a problem

Food Safety News

Smoked and graved salmon continues to pose a Listeria infection risk with evidence showing a large proportion of listeriosis cases are caused by these products, according to scientists in Germany.

In 2021 and 2022, there were 66 cases of listeriosis in 15 outbreaks, reported the Robert Koch Institute (RKI).

A total of 24 outbreaks of listeriosis across federal states with links to smoked or graved salmon products as the cause have been found since 2010.

Research – High Genetic Diversity and Virulence Potential in Bacillus cereus sensu lato Isolated from Milk and Cheeses in Apulia Region, Southern Italy

MDPI

Abstract

The Bacillus cereus group includes species that act as food-borne pathogens causing diarrheal and emetic symptoms. They are widely distributed and can be found in various foods. In this study, out of 550 samples of milk and cheeses, 139 (25.3%) were found to be contaminated by B. cereus sensu lato (s.l.). One isolate per positive sample was characterized by Multilocus Sequence Typing (MLST) and for the presence of ten virulence genes. Based on MLST, all isolates were classified into 73 different sequence types (STs), of which 12 isolates were assigned to new STs. Virulence genes detection revealed that 90% and 61% of the isolates harboured the nheABC and the hblCDA gene cluster, respectively. Ninety-four percent of the isolates harboured the enterotoxin genes entS and entFM; 8% of the isolates possessed the ces gene. Thirty-eight different genetic profiles were identified, suggesting a high genetic diversity. Our study clearly shows the widespread diffusion of potentially toxigenic isolates of B. cereus s.l. in milk and cheeses in the Apulia region highlighting the need to adopt GMP and HACCP procedures along every step of the milk and cheese production chain in order to reduce the public health risk linked to the consumption of foods contaminated by B. cereus s.l.