Category Archives: E.coli

Research – Microbial Status of White Asparagus Spears during Storage in Moist Packages

Journal Food Protection

ABSTRACT

White asparagus is a high-value commodity of large economic importance in Germany. Its harvest period lasts only a limited part of the year, during which daily yield and also market demand are highly variable. Harvested asparagus is perishable; thus, quality control and shelf life must be ensured by proper handling, e.g., avoiding fresh weight losses and, at the same time, limiting microbial growth. The aim of this study was to determine the effect of moist asparagus packaging on unpeeled white asparagus (cv. Gijnlim). Water was added to some of the packages to reduce fresh weight losses and to study the consequences for microbial growth. Polythene bag packaging, lined inside with cellulose fleece, was used to hold 500-g bunches of spears, covered partly (open bag) or totally (closed bag). Storage duration was 7 days, at temperatures of 2°C, 8°C, and a combination of 2 and 22°C, simulating retail conditions. Using a standardized cultivation method for food assessment, CFU counts (5.20 to 7.95 log CFU), number of pseudomonads (4.79 to 7.90 log CFU), lactic acid bacteria (<3.00 to 3.94 log CFU), Enterobacteriaceae (4.26 to 7.15 log CFU, including Escherichia coli <1.00 log CFU), yeasts (<2.30 to 3.15 to 3.53 log CFU), and molds (<2.30 log CFU), as well as sulfite-reducing clostridia (<1 log CFU) were determined. Temperature was the most important factor for microbial growth. Additional water had no effect in most cases; it inhibited most of the fresh weight losses compared to dry treatments in this study but led to 2% weight increase in closed bags. Our results point to the conclusion that moist packaging would be a feasible alternative to dry wrapping with regard to weight retention, and it did not increase growth of the analyzed microbial groups to an unacceptable value.

HIGHLIGHTS
  • Moist packaging of white asparagus does not necessarily increase microbial load after storage.

  • Microbial counts were lower after 1 week of storage in a closed versus open package.

  • Microbial growth did not exceed tolerable values.

Research – Changes detected in the genome sequences of Escherichia coli, Listeria monocytogenes, Vibrio parahaemolyticus, and Salmonella enterica after serial subculturing

Canadian Science Publishing

Whole genome sequencing (WGS) is rapidly replacing other molecular techniques for identifying and subtyping bacterial isolates. The resolution or discrimination offered by WGS is significantly higher than that offered by other molecular techniques, and WGS readily allows infrequent differences that occur between 2 closely related strains to be found. In this investigation, WGS was used to identify the changes that occurred in the genomes of 13 strains of bacterial foodborne pathogens after 100 serial subcultures. Pure cultures of Shiga-toxin-producing Escherichia coliSalmonella entericaListeria monocytogenes, and Vibrio parahaemolyticus were subcultured daily for 100 successive days. The 1st and 100th subcultures were whole-genome sequenced using short-read sequencing. Single nucleotide polymorphisms (SNPs) were identified between the 1st and final culture using 2 different approaches, and multilocus sequence typing of the whole genome was also performed to detect any changes at the allelic level. The number of observed genomic changes varied by strain, species, and the SNP caller used. This study provides insight into the genomic variation that can be detected using next-generation sequencing and analysis methods after repeated subculturing of 4 important bacterial pathogens.

Research -Adaptation to life in cattle may be driving E. coli to develop harmful features

Science Daily

A large-scale study of the genetic differences and similarities among E. coli bacteria from cattle and humans indicates that features causing food poisoning in humans may continuously be emerging in bacteria from cattle as a means to better adapt to their environment.

While E. coli bacteria are one of the most well-known causes of food poisoning, a wide variety of E. coli strains exists, many of which are harmless, permanent residents of our intestines. However, the ingestion of harmful strains of E. coli on contaminated food can lead to severe illness, vomiting, and diarrhea.

“To develop the most effective preventive measures, we need a deep understanding of the source and living conditions of the bacteria,” says Yoshitoshi Ogura, associate professor at Kyushu University’s Department of Bacteriology, who led the research.

“Although cattle have long been thought to be a main source of E. coli that cause food poisoning, why dangerous forms would keep appearing in cattle has been unclear.”

Ogura’s group, in collaboration with researchers across Japan and in France, Belgium, and the United States, set out to help answer this question by investigating the genetics of E. coli bacteria collected from cattle and humans in 21 countries spanning six continents.

“To date, there have been only a limited number of reports of the genome sequences of E. coli from cattle, so we needed to fill that gap,” comments Yoko Arimizu, first author on the paper in Genome Research announcing the new results.

While the largest number of samples was from Japan, strains from other regions exhibited characteristics that were well distributed among those from Japan, indicating a good diversity of the set of samples.

Based on the genetic features of the bacteria, the researchers could generally separate the different strains of E. coli into two groups, with one primarily consisting of bacteria collected from humans and the other of those from cattle.

Applying the same analysis to clinically obtained E. coli that are known to cause illness, the researchers found that most of the strains causing intestinal problems belonged to the group associated with cattle.

Furthermore, many of the samples from cattle exhibited features similar to those causing food poisoning, such as the production of Shiga toxin. While these features generally appear not to cause illness in cattle, their prevalence in the investigated samples suggests that such characteristics are beneficial for life in a cattle’s intestine.

“As long as there is pressure to maintain or strengthen these illness-producing characteristics to better adapt to living in a cattle’s intestine, new variants of E. coli that cause food poisoning are likely to continue appearing,” states Ogura.

The researchers speculate that these characteristics may help E. coli protect itself from bacteria-eating organisms present in cattle intestines, but more work is needed to identify the exact reason.

Research – How E. coli knows how to cause the worst possible infection

Science Daily

Ecoli Istock

Image CDC

A pair of University of Virginia School of Medicine scientists have revealed how E. coli seeks out the most oxygen-free crevices of your colon to cause the worst infection possible. The discovery could one day let doctors prevent the infection by allowing E. coli to pass harmlessly through the body.

The new discovery shows just how the foodborne pathogen knows where and when to begin colonizing the colon on its way to making you sick. By recognizing the low-oxygen environment of the large intestine, the dangerous bacterium gives itself the best odds of establishing a robust infection — one that is punishing for the host.

“Bacterial pathogens typically colonize a specific tissue in the host. Therefore, as part of their infection strategies, bacterial pathogens precisely time deployment of proteins and toxins to these specific colonization niches in the human host. This allows the pathogens to save energy and avoid detection by our immune systems and ultimately cause disease,” said researcher Melissa Kendall, PhD, of UVA’s Department of Microbiology, Immunology and Cancer Biology. “By knowing how bacterial pathogens sense where they are in the body, we may one day be able to prevent E. coli, as well as other pathogens, from knowing where it is inside a human host and allow it to pass through the body without causing an infection.”

A Bacterial Goldilocks

E. coli naturally lives in our colons, and most strains do us no harm. But there are several strains that can cause cramps, diarrhea, vomiting, even kidney failure and death. Children are at particular risk. As such, E. coli outbreaks appear periodically in the news. In July, for example, people in several states were sickened by E. coli linked to ground bison meat.

Kendall and graduate student Elizabeth M. Melson have shed important light on how harmful E. coli infections establish themselves in the body. The researchers outlined a process the bacteria use to detect low oxygen levels in the large intestine and then produce proteins that allow E. coli to attach to host cells and establish infection.

Oxygen actually diffuses from the intestinal tissue into the gut, and there are comparably higher levels in the small intestine than the large. E. coli specifically waits until it has reached the-low oxygen large intestine before striking.

E. coli‘s vital asset is a small form of RNA that activates particular genes when oxygen levels are low enough, the researchers reveal. It’s at this point that the infection really gets established. Thanks to this natural sensing process, the bacteria are able to establish infection and begin to manufacture harmful Shiga toxins.

The researchers believe that other bacterial pathogens, such as Shigella and Salmonella, likely employ a similar control mechanism, though more work needs to be done to establish that.

“If scientists can figure how to block oxygen sensing, we may be able to prevent E. coli from making proteins that allow it to stick to our guts,” Kendall said. “This may be an effective strategy to limit infection, and because we are not targeting growth or survival, E. coli may not develop drug resistance — it just doesn’t know where it is.”

France – E. Coli Bacteria: Chaource Lincet and Gaugry Raw Milk Cheeses Recalled – STEC E.coli O111:H8

Teller Report

A few hundred Chaource raw milk cheese brands Lincet and Gaugry, sold throughout France, are subject to a recall procedure after the demonstration of the presence of Escherichia coli. A check has highlighted in these products, manufactured by the Lincet cheese factory in Vaudes in the Aube, the presence of Escherichia coli O111: H8, indicates the cheese Friday in a statement.

Research – How E. coli knows how to cause the worst possible infection

Science Daily

A pair of University of Virginia School of Medicine scientists have revealed how E. coli seeks out the most oxygen-free crevices of your colon to cause the worst infection possible. The discovery could one day let doctors prevent the infection by allowing E. coli to pass harmlessly through the body.

The new discovery shows just how the foodborne pathogen knows where and when to begin colonizing the colon on its way to making you sick. By recognizing the low-oxygen environment of the large intestine, the dangerous bacterium gives itself the best odds of establishing a robust infection — one that is punishing for the host.

“Bacterial pathogens typically colonize a specific tissue in the host. Therefore, as part of their infection strategies, bacterial pathogens precisely time deployment of proteins and toxins to these specific colonization niches in the human host. This allows the pathogens to save energy and avoid detection by our immune systems and ultimately cause disease,” said researcher Melissa Kendall, PhD, of UVA’s Department of Microbiology, Immunology and Cancer Biology. “By knowing how bacterial pathogens sense where they are in the body, we may one day be able to prevent E. coli, as well as other pathogens, from knowing where it is inside a human host and allow it to pass through the body without causing an infection.”

RASFF Alert -STEC E.coli – Chilled Beef

RASFF-Logo

RASFF – shigatoxin-producing Escherichia coli (stx1+, stx2+,) in chilled beef from Argentina in Italy

Research – Application of continuous-type pulsed ohmic heating system for inactivation of foodborne pathogens in buffered peptone water and tomato juice

Science Directl

Abstract

The purpose of this study was to inactivate Escherichia coli O157:H7, SalmonellaTyphimurium, and Listeria monocytogenes by continuous-type pulsed ohmic heatingin buffered peptone water (BPW) and tomato juice. First, BPW inoculated with the three pathogens were treated at different flow rates (0.2–0.4 LPM) and treatment voltages (9.43–12.14 Vrms/cm). Both heating rate of BPW and reduction rates of pathogens increased corresponding to decreased flow rate. Accordingly, higher numbers of pathogens survived at a higher flow rate (0.4 LPM). Increasing treatment voltage was an effective way to inactivate pathogens at 0.4 LPM, but the heating rate overly accelerated with increasing voltage adversely affecting food quality. Alternatively, increasing initial temperature by preheating can help inactivate pathogens in the early treatment stage without affecting heating rate. From the BPW experiments, we identified that treatment conditions such as flow rate, voltage, and initial temperature are important factors determining pathogen inactivation performance of continuous-type ohmic heating. When applied to tomato juice, 5 log reductions of all three pathogens were achieved by applying 12.14Vrms/cm ohmic heating with 0.2 LPM flow rate after preheating sample to 50 °C with a water bath. Quality aspects of color and lycopene content were observed, and a and b values decreased after treatment. Because preheating with additional equipment is inconvenient and occupies valuable space, we developed sequential three cylinder type ohmic heating. By applying the developed sequential ohmic heating, 5 log reductions were achieved for all three pathogens without preheating under the same treatment conditions. Therefore, we concluded that sequential continuous-type ohmic heating can be used utizied effectively to control foodborne pathogensby the juice industry.

Summary of the last two weeks RASFF Alerts – E.coli – Live Mussels – Live Cockles

RASFF-Logo

RASFF – high count of Escherichia coli (up to 490 MPN/100g) in live mussels (Mytilus galloprovincialis) from Italy in Italy

RASFF – Escherichia coli (>18000 /100g) in live cockles from the United Kingdom in the UK

Summary of the last two weeks RASFF Alerts – STEC E.coli – Frozen Minced Meat – Chilled Beef

RASFF-Logo

RASFF – shigatoxin-producing Escherichia coli (O157:H7, O26:H11) in frozen beef minced meat with raw material from Spain in France

RASFF – shigatoxin-producing Escherichia coli (stx2+) in chilled beef from Argentina in Italy