Category Archives: Food Microbiology Research

USA – Backyard Chickens hospitalize 273 and kill 2 with Salmonella – 1,135 sick in 2021 including 268 under the age of 5

Food Poison Journal

Salmonella Campylobacter

CDC: This year’s investigation of outbreaks linked to backyard poultry is over. However, any backyard poultry can carry Salmonella germs that can make you sick. Always take steps to stay healthy around your flock.

CDC and public health officials in several states investigated multistate outbreaks of Salmonella infections with serotypes of Enteritidis, Hadar, Indiana, Infantis, Mbandaka, and Muenchen.

Epidemiologic and laboratory data showed that contact with backyard poultry made people sick.

A total of 1,135 people infected with one of the outbreak strains were reported from 48 states, the District of Columbia, and Puerto Rico. The true number of sick people in these outbreaks was likely much higher than the number reported, and these outbreaks may not have been limited to the states with known illnesses. This is because many people recover without medical care and are not tested for Salmonella.

USA – Leftovers: Let’s Keep the Best Part of Thanksgiving Safe

FSIS USDA

he year’s biggest meal will be over soon, but delicious Thanksgiving leftovers will sustain you from Black Friday to Cyber Monday. Keep your favorite leftovers safe by following these food safety steps:

  • Remember the Two-Hour Rule: Refrigerate perishable items within two hours of coming out of the oven or refrigerator. After two hours, perishable food enters the “Danger Zone” (between 40 F and 140 F), where bacteria can multiply quickly and cause food to become unsafe. Perishable food should be discarded if left out for longer than two hours, so refrigerate or freeze items to prevent food waste.
  • Use Shallow Containers: After you breakdown your Thanksgiving meal into smaller portions, store leftover food in shallow containers in the refrigerator until the Monday after Thanksgiving, or in the freezer for later use.
  • Freeze or Consume Within Four Days: Use the Monday after Thanksgiving as a reminder that it is the last day you can safely eat leftovers. If you want to keep leftovers longer, freeze them within that four-day period. Frozen food stays safe indefinitely, though the quality may decrease over time (best quality if eaten within six months).
  • Reheat to 165 F: Make sure your reheated leftovers reach 165 F as measured with a food thermometer. Reheat sauces, soups and gravies safely by bringing them to a rolling boil.
  • Microwave Food Safely: When reheating in the microwave, cover and rotate the food for even heating. Arrange food items evenly in a covered microwave safe glass or ceramic dish and add some liquid, if needed. Because microwaves have cold spots, check the internal temperature of the food in several places with a food thermometer after allowing a resting time.

For more questions about food safety, contact the USDA’s Meat and Poultry Hotline at 1-888-MPHotline (1-888-674-6854) or email MPHotline@usda.gov to reach a food safety expert or chat live at ask.usda.gov from 10 a.m. to 6 p.m. Eastern Time, Monday through Friday, and 8 a.m. to 2 p.m. Eastern Time on Thanksgiving Day.

Research – Emerging Risks in Food: Probiotic Enterococci Pose a Threat to Public Health through the Food Chain

MDPI

Probiotics have been associated with clinical infections, toxicity, and antimicrobial resistance transfer, raising public concerns. Probiotic enterococci are emerging food risks as opportunistic pathogens, yet little attention has been paid to them. Herein, we collected 88 enterococcal isolates from probiotic products used for humans, companion animals, livestock, and aquaculture. Results showed that all 88 probiotic enterococcal isolates harbored diverse virulence genes, multiple antimicrobial resistance genes, and mobile genetic elements. Notably, 77 isolates were highly resistant to gentamicin. Representative enterococcal isolates exerted toxic activities in both in vitro and in vivo models. Collectively, our findings suggest that probiotic enterococci may be harmful to hosts and pose a potential threat to public health. View Full-Text

Research – Gamma radiation treatment of postharvest produce for Salmonella enterica reduction on baby carrot and grape tomato

Wiley Online

Occurrences and contamination of Salmonella enterica on produce are a significant food safety issue. The objective of this research was to evaluate the effects of low-dose gamma radiation on survival and reductions of S. enterica on postharvest carrot and tomato. Irradiation treatments of 0–1 kGy were applied on produce, following pathogen inoculations in replicated experiments. The effects of temperatures (5 and 20°C) and storage times (0, 3, and 7 days) on pathogen reductions were determined. The mean Salmonella populations in untreated control produce varied from 7.12 ± 0.05 to 7.54 ± 0.12 log Cfu/g of produce. Pathogen reductions by gamma radiation were significant (p < .05) and varied with storage times (0–7 days). Salmonella populations were reduced on carrot by 4.3 logs (5°C) and 3.7 logs (20°C) at 1 kGy treatment. On tomato, pathogen reductions at 1 kGy did not differ significantly (p > .05) and were 5.6 and 5.8 logs at 5 and 20°C, respectively. Linear decreases in Salmonella populations occurred as radiation dosage increased. Injury of bacterial cells from radiation treatment was comparatively greater at 1 kGy than other treatments. Low-dose gamma radiation treatment resulted in significant Salmonella reductions on produce and enhanced postharvest safety of carrot and tomato.

Research – Diversity of Listeria monocytogenes Strains Isolated from Food Products in the Central European Part of Russia in 2000–2005 and 2019–2020

MDPI

Totally, 45 L. monocytogenes strains isolated from meat, poultry, dairy, and fish products in the Central European part of Russia in 2001–2005 and 2019–2020 were typed using a combined MLST and internalin profile (IP) scheme. Strains belonged to 14 clonal complexes (CCs) of the phylogenetic lineages I and II. Almost half of the strains (20 of 45) belonged to six CCs previously recognized as epidemic clones (ECs). ECI and ECV strains were isolated during both studied periods, and ECII, ECIV, ECVI, and ECVII strains were isolated in 2001–2005, but not in 2019–2020. ECI, ECIV, ECV, and ECVII strains were isolated from products of animal origin. ECII and ECVI were isolated from fish. Testing of invasion efficiencies of 10 strains isolated in different years and from different sources and belonging to distinct CCs revealed a statistically significant difference between phylogenetic lineage I and II strains but not between ECs and non-EC CCs or strains differing by year and source of isolation. Strains isolated in 2001–2005 were characterized by higher phylogenetic diversity and greater presentation of ECs and CCs non-typical for natural and anthropogenic environments of the European part of Russia comparatively to isolates obtained in 2019–2020.Closing of the Russian market in 2019–2020 for imported food might be responsible for these differences. View Full-Text

Research – Peanut Skins as a Natural Antimicrobial Feed Additive to Reduce the Transmission of Salmonella in Poultry Meat Produced for Human Consumption

Journal of Food Protection

Salmonella is the leading cause of bacterial foodborne zoonoses in humans. Thus, the development of strategies to control bacterial pathogens in poultry is essential. Peanut skins, a considerable waste by-product of the peanut industry is discarded and of little economic value. However, peanut skins contain polyphenolic compounds identified that have antimicrobial properties. Hence, we aim to investigate the use of peanut skins as an antibacterial feed additive in the diets of broilers to prevent the proliferation of Salmonella Enteritidis (SE). One hundred sixty male hatchlings (Ross 308) were randomly assigned to, (1) PS: peanut skin diet without SE inoculation (2) PSSE: peanut skin diet and SE inoculation 3) CON: control diet without SE inoculation (4) CONSE: control diet with SE inoculation. Feed intake and body weights were determined at week 0 and 5. On days 10 and 24 post hatch, 3 birds/pen (24 total) from each treatment group were euthanized and the liver, spleen, small intestine, and ceca were collected. The weights of the liver, spleen and ceca were recorded. Organ invasion was determined by counting SE colonies. Each pen served as an experimental unit and was analyzed using a t-test. Performance data was analyzed in a completely randomized design using a general linear mixed model to evaluate differences. There were no significant differences ( P > 0.05) in weekly average pen body weight, total feed consumption, bird weight gain and feed conversion ratio between the treatment groups. There were no significant differences in SE CFU/g for fecal, litter or feed between treatment groups CONSE and PSSE. However, for both fecal and litter, the PSSE treatment group tended (P ≤0.1) to have a lower Salmonella CFU/g compared to the CONSE treatment group. The results indicate that peanut skins may have potential application as an antimicrobial feed additive to reduce the transmission or proliferation of SE in poultry environments or flocks.

Research – How Safe to Eat Are Raw Bivalves? Host Pathogenic and Public Health Concern Microbes within Mussels, Oysters, and Clams in Greek Markets

MDPI

Raw-bivalves consumption is a wide trend in Mediterranean countries. Despite the unambiguous nutritional value of seafood, raw consumption of bivalves may involve risks that could pose a significant threat to consumers’ health. Their filter-feeding behavior is responsible for the potential hosting of a wide variety of microorganisms, either pathogenic for the bivalves or public health threats. Under this prism, the current study was conducted in an effort to evaluate the risk of eating raw bivalves originating from the two biggest seafood markets in Thessaloniki, the largest production area of bivalves in Greece. Both microbiological and molecular methodologies were applied in order to assess the presence of various harmful microbes, including noroviruses, BonamiaMarteiliaEsherichia coliSalmonella, and Vibrio. Results indicated the presence of several Vibrio strains in the analyzed samples, of which the halophilic Vibrio harveyi was verified by 16S rRNA sequencing; other than this, no enteropathogenic Vibrio spp. was detected. Furthermore, although Esherichia coli was detected in several samples, it was mostly below the European Union (EU) legislation thresholds. Interestingly, the non-target Photobacterium damselae was also detected, which is associated with both wound infections in human and aquatic animals. Regarding host pathogenic microorganisms, apart from Vibrio harveyi, the protozoan parasite Marteilia refrigens was identified in oysters, highlighting the continuous infection of this bivalve in Greece. In conclusion, bivalves can be generally characterized as a safe-to-eat raw food, hosting more bivalve pathogenic microbes than those of public health concern.

USA – CDC – This year’s investigation of Salmonella outbreaks linked to backyard poultry is over

CDC

Salmonella Campylobacter

November 18, 2021

CDC and public health officials in several states investigated multistate outbreaks of Salmonella infections with serotypes of Enteritidis, Hadar, Indiana, Infantis, Mbandaka, and Muenchen.

Epidemiologic and laboratory data showed that contact with backyard poultry made people sick.

Epidemiologic Data

A total of 1,135 people infected with one of the outbreak strains were reported from 48 states, the District of Columbia, and Puerto Rico (see map). The true number of sick people in these outbreaks was likely much higher than the number reported, and these outbreaks may not have been limited to the states with known illnesses. This is because many people recover without medical care and are not tested for Salmonella.

Illnesses started on dates ranging from December 15, 2020, to October 10, 2021 (see timeline). Age information was available for 1,132 people. Their ages ranged from less than 1 to 97 years, with a median age of 37 years. Many were young children: 268 (24%) were under 5 years and 140 (12%) were under 1 year. Of 1,107 people with sex information available, 646 (58%) were female. Of 829 people with information available, 273 (33%) were hospitalized. Two deaths were reported, one from Indiana and one from Virginia.

State and local public health officials interviewed people about the animals they came into contact with the week before they got sick. Of the 677 people interviewed, 449 (66%) reported contact with backyard poultry before getting sick.

Traceback Data

Of 293 people who reported contact with backyard poultry and provided more information, 212 (72%) reported that they bought backyard poultry this year. Purchase locations included feedstores, auctions, and directly from hatcheries. Traceback of these purchases did not identify a single, common source of backyard poultry. A total of 264 separate purchases from more than 150 purchase locations of 70 different companies were reported. At least 17 hatcheries supplied backyard poultry to these purchase locations.

Laboratory Data

Public health investigators used the PulseNet system to identify illnesses that were part of this outbreak. CDC PulseNet manages a national database of DNA fingerprints of bacteria that cause gastrointestinal illnesses. DNA fingerprinting is performed on bacteria using a method called whole genome sequencing (WGS). WGS showed that bacteria from sick people’s samples were closely related genetically. This means that people in these outbreaks likely got sick from the same type of animal.

Public health officials from several states found two of the outbreak strains (Hadar and Enteritidis) from sick people’s backyard poultry and the backyard poultry environment.

  • On April 15, public health officials in Ohio found the outbreak strain of Salmonella Hadar from a sick person’s ducklings.
  • On May 7, local public health officials in California found the outbreak strain of Salmonella Hadar from a sick person’s duck environment (the ground, duck poop, and duck’s sleeping area).
  • On June 1, public health officials in Arizona found the outbreak strain of Salmonella Hadar from a sick person’s chickens and the chicken environment (chickens’ roost and water source).
  • On June 15, public health officials in Maryland found the outbreak strain of Salmonella Enteritidis from a sick person’s chickens.

WGS was also used to identify any predicted antibiotic resistance for bacteria from 1,101 sick people’s samples, 4 animal samples, and 7 environmental samples. Of the 1,112 samples, 394 (35%) were predicted to be resistant to one or more of the following antibiotics: amoxicillin-clavulanic acid (0.5%), ampicillin (0.9%), chloramphenicol (0.3%), cefoxitin (0.5%), ceftriaxone (0.5%), ciprofloxacin (0.1%), gentamicin (1.8%), kanamycin (0.4%), streptomycin (33.8%), sulfamethoxazole (2.2%), tetracycline (32.6%), and trimethoprim-sulfamethoxazole (0.2%). Testing of 11 sick people’s samples using standard antibiotic susceptibility testing methods by CDC’s National Antimicrobial Resistance Monitoring System (NARMS) confirmed these results (streptomycin and kanamycin were not tested by this method).

Most people with Salmonella illness recover without antibiotics. However, if antibiotics were needed, some illnesses in these outbreaks may have been difficult to treat with some commonly recommended antibiotics and may have required a different antibiotic choice.

Public Health Action

CDC always advises everyone to take steps to stay healthy around backyard poultry. CDC routinely works with hatcheries and stores that sell poultry to educate new poultry owners and control the spread of Salmonella at hatcheries.

Czech Republic – Chilled Chicken Quarters – Salmonella

Potravinynapranyri

Place of inspection:
Krmelín ( Staroveská 406, 73924 Krmelín )
IN: 73281042
Food group: Meat and meat products Non-prepacked: meat, minced meat, meat preparations

Chilled chicken quarters
Category: Unsafe food
Unsatisfactory parameter:

Salmonella Enterica ser. Enterica

The pathogenic bacterium Salmonella Enterica serum was found in raw meat Enterica . This bacterium can cause a condition called salmonellosis.

[machine translate]

Usability date: 10.10.2021
Producer: ZPD “MARICA”; General partnership JMEK Wróbel 43-300, Bielsko-Biala, 20 Straconki Street, PL 24034301
Country of origin:  Poland
Date of taking the sample: 10/6/2021
Reference number: 21-000075-SVS-CZ
Sample was detected by official control of State Veterinary Administration.

USA – Keep your Thanksgiving Full of Turkey and Free from Foodborne Illness

USDA

Next week, Americans will enjoy Thanksgiving with family and friends. While the COVID-19 pandemic is still top-of-mind, the U.S. Department of Agriculture (USDA) reminds us all that it’s also important to keep family and friends safe from foodborne illness this Thanksgiving.

“Thanksgiving is one of my favorite times to remind people about food safety,” said Agriculture Secretary Tom Vilsack. “I personally know how much effort it takes to prepare a full Thanksgiving meal, and I always ensure I’m following safe food practices like handwashing, using a food thermometer and avoiding cross-contamination.”

By following the tips below, you’ll lessen the chances of having a visit from foodborne illness — an unwelcome visitor — at your table this Thanksgiving.

Clean and Sanitize

Always wash your hands before preparing and handling food. Handwashing helps to prevent the spread of germs. Recent USDA observational research showed that 95 percent of participants failed to properly wash their hands before handing food. Make sure to follow the steps to wash your hands properly.

Clean and sanitize any surfaces that will touch food such as tabletops, kitchen counters, stoves, sinks, etc.

Avoid Cross-Contamination

In a recent study (PDF, 1.7 MB), USDA found 60 percent of kitchen sinks were contaminated with germs after participants washed or rinsed poultry. USDA advises against washing your turkey; however, if you do wash your turkey in the sink, it must be fully cleaned and sanitized afterwards. To clean, rub down surfaces — including the sink, cutting boards and counter tops — with soap and hot water, and then sanitize them with a cleaning solution to remove any residual germs. You can use a homemade solution of one tablespoon of unscented, liquid chlorine bleach in one gallon of water. Let the surfaces air dry. Be sure to use separate cutting boards—one for meat and another for vegetables and fruit.

Thaw the Turkey Safely

Never thaw a turkey on a counter or in hot water. USDA recommends thawing a turkey in a refrigerator since this allows for slow and safe thawing. The turkey will need about 24 hours for every four to five pounds of turkey. After thawing, it is safe to store in the refrigerator for one to two days. Turkey can also be thawed in a cold-water bath or microwave; however, it must be cooked immediately after it has thawed using these methods. If using the cold-water method, allow 30 minutes per pound and submerge the turkey in its original wrapping to avoid cross-contamination. It’s safe to cook a turkey from its frozen state; however, it will take at least 50 percent longer to fully thaw. Lastly, never leave a raw turkey out at room temperature for more than two hours.

Cook Thoroughly

Make sure your turkey reaches an internal temperature of 165 F. Use a food thermometer to measure the internal temperature in three parts: the thickest part of the breast, the innermost part of the wing and the innermost part of the thigh. USDA recommends using a food thermometer even if the turkey has a pop-up temperature indicator to ensure it has reached 165 F in the three previously stated places. When cooking a turkey breast instead of a whole turkey, check the temperature with the food thermometer to ensure it reaches 165 F at the thickest part the breast. All previously cooked side dishes should be reheated to 165 F.

Stuffing your Turkey

USDA does not recommend stuffing your turkey because it can be a breeding ground for bacteria if not prepared carefully. However, if you plan to stuff your turkey, please keep the following in mind:

  • The wet and dry ingredients for the stuffing should be prepared separately from each other and refrigerated until ready to use.
  • Stuff the turkey loosely — about 3/4 cup of stuffing per pound.
  • Immediately place the stuffed, raw turkey in an oven set no lower than 325 F.
  • A stuffed turkey will take longer to cook. Once it has finished cooking, place a food thermometer in the center of the stuffing to ensure it has reached a safe internal temperature of 165 F.
  • Let the cooked turkey stand 20 minutes before removing the stuffing.

For more information on turkey stuffing, visit Turkey Basics: Stuffing.

The Two-Hour Rule

All perishable foods must be refrigerated within two hours of being cooked, or one hour if the temperature is 90 F or above. After two hours, perishable food will enter the “Danger Zone” (between 40 F and 140 F), which is where bacteria can multiply quickly and cause the food to become unsafe. Discard all foods that have been left out for more than two hours.

Leftovers

After the meal (but within the two-hour rule), separate larger quantities of leftovers in small shallow containers and place them in the refrigerator. Thanksgiving leftovers are safely stored in a refrigerator for up to four days. In the freezer, leftovers can be safely frozen indefinitely but will keep best quality for two to six months. Reheat leftovers to an internal temperature of 165 F. Check the internal temperature of the food in several places with a food thermometer after allowing a resting time.

For Thanksgiving food safety questions, call the USDA Meat and Poultry Hotline at 1-888-MPHotline (1-888-674-6854), email MPHotline@usda.gov or chat live at ask.usda.gov from 10 a.m. to 6 p.m. Eastern Time, Monday through Friday.

Do you have any last-minute turkey day questions? The Meat and Poultry Hotline will be open on Thanksgiving Day from 8am-2pm EST.