Category Archives: Vibrio alginolyticus

Research -Isolation and Characterization of Bacteriophage VA5 against Vibrio alginolyticus

MDPI

Abstract

Bacteriophages, or phages, can be used as natural biological control agents to eliminate pathogenic bacteria during aquatic product cultivation. Samples were collected from seafood aquaculture water and aquaculture environmental sewage, and phage VA5 was isolated using the double-layer agar plate method, with Vibrio alginolyticus as the host bacteria. The purified phage strain was subjected to genome sequencing analysis and morphological observation. The optimal multiplicity of infection (MOI), the one-step growth curve, temperature stability, and pH stability were analyzed. Phage VA5 was observed to have a long tail. Whole-genome sequencing revealed that the genome was circular dsDNA, with 35,866 bp length and 46% G+C content. The optimal MOI was 1, the incubation period was 20 min, the outbreak period was 30 min, and the cleavage amount was 92.26 PFU/cell. The phage showed good activity at −20 °C, 70 °C, and pH 2–10. Moreover, the phage VA5 exhibited significant inhibitory effects on V. alginolyticus-infected shrimp culture. The isolated phage VA5 has a wide range of host bacteria and is a good candidate for biological control of pathogenic bacteria.

Research – Scientists Discover How Foodborne Vibrio Infects People, Could Lead to New Treatments

Food Safety.Com

Food Illness

Researchers at the University of Texas (UT) Southwestern Medical Center have discovered how foodborne pathogen Vibrio parahaemolyticus infects people after eating raw or undercooked shellfish. The findings could lead to new ways to treat illness caused by the enteric bacteria.

The study provides the first visual evidence of how a gut bacterial pathogen uses an “assembly method” to build syringe-like structures to inject toxins into intestinal cells, giving a new view of how enteric bacteria, when exposed to bile acids, efficiently respond and build a virulence system.

Research – Advances in science and risk assessment tools for Vibrio parahaemolyticus and V. vulnificus associated with seafood: meeting report

WHO

Globally, the Vibrio parahaemolyticus and Vibrio vulnificus represent important human pathogens associated with the consumption of seafood. In response to the requests for scientific advice from Codex Committee on Food Hygiene (CCFH), risk assessments for the pathogens V. vulnificus, V. cholerae, V. parahaemolyticus and guidance on methods for the detection of Vibrio spp. with seafood have been conducted and published previously by JEMRA. In order to provide an update on the state-of-the-art advice regarding risk assessment for V. parahaemolyticus and V. vulnificus in seafood, an expert meeting was convened.

Several critical developments in the last decade were subsequently noted by the expert working group: 1) The emergence of highly pathogenic strains; 2) In response to climate change, there has been a significant geographical spread regarding when and where these seafood-associated Vibrio infections; 3) Demographic considerations are very important; 4) A range of new approaches for best practice; and 5) A range of new methods, such as those utilising genomics and satellite imagery. This report describes the output of that expert meeting.

Research – Prevalence, genomic characterization, and risk assessment of human pathogenic Vibrio species in seafood

Journal of Food Protection

Pathogenic Vibrio spp. are largely responsible for human diseases caused through consumption of contaminated seafood. The aim of this study was to determine the prevalence, population densities, species diversity and molecular characteristics of pathogenic Vibrio in various seafood commodities and its associated health risks. Samples of finfish and shellfish (oysters and sea urchins) were collected from different regions and analyzed for Vibrio using the Most Probable Number (MPN) technique. Genomic DNA of putative Vibrio isolates was analyzed by whole genome sequencing (WGS) for taxonomic identification and identification of genes responsible for virulence and antimicrobial resistance. The risk of vibrio-related illnesses due to the consumption of contaminated seafood was assessed using Risk Ranger. Population densities of presumptive Vibrio fell in the range of 2.6 – 4.4 Log MPN/g and correlated with seasonality, with the summer season favoring significantly (p < 0.05) higher Vibrio counts. A total of 15 Vibrio isolates were identified as V. alginolyticus (5), V . parahaemolyticus (6), V. harveyi (2) or V. diabolicus (2). Two of the six V. parahaemolyticus isolates (ST 2504 and ST 2505) originating from oysters were found to be either tdh + or trh + and thus considered a human pathogen due to elaboration of Thermostable Direct Hemolysin (TDH) or TDH-related hemolysin (TRH). In addition to virulence genes, the shellfish isolates also harbored genes encoding resistance to multiple antibiotics including tetracycline, penicillin, quinolone and beta-lactam antibiotics, thus arousing concern. The risk assessment exercise pointed to an estimated 21 annual cases of V. parahaemolyticus -associated gastroenteritis in the general population attributed to consumption of contaminated oysters. This study highlights not only the wide prevalence and diversity of Vibrio in seafood, but also the potential of certain strains to threaten public health.

Research – Epidemiological and microbiological investigation of a large increase in vibriosis, northern Europe, 2018

Eurosurveillance

Food Illness

The habitat of  spp. bacteria is fresh and brackish water with moderate salinity. Non-toxigenic , as well as several human pathogenic non-cholera  species, including  and , cause vibriosis after seawater exposure or consumption of contaminated seafood [1]. Clinical manifestations range from mild gastroenteritis and otitis to wound infections that may lead to severe necrotising fasciitis and septicaemia with a potentially fatal outcome [25].

The Baltic Sea region is one of the areas where increasing numbers of cases related to  species causing vibriosis (VCV) have been reported in the last decades [6]. Several studies have shown how the occurrence of heatwaves, which lead to an increase in sea surface temperature, are linked with an increase in the number of reported vibriosis cases [4,712]. For instance, the years with an especially warm summer in the Baltic Sea region, 2006, 2010 and particularly 2014 (the warmest year in historical records at the time), were also the years with the largest number of vibriosis cases reported [6,11].

However, there is a notable gap in surveillance data for vibriosis since it is not a notifiable disease in the majority of European countries [1,6]. Therefore, the aim of this multi-country study was to describe the epidemiology of vibriosis cases in countries bordering the North and Baltic Seas area during the exceptionally warm year of 2018 [13,14], in order to investigate the extent of these infections in the study countries, map their genetic diversity, understand the predictors for developing severe vibriosis, and propose recommendations for public health measures.

Research – Role of Marine Bacterial Contaminants in Histamine Formation in Seafood Products: A Review

MDPI

Histamine is a toxic biogenic amine commonly found in seafood products or their derivatives. This metabolite is produced by histamine-producing bacteria (HPB) such as Proteus vulgarisP. mirabilisEnterobacter aerogenesE. cloacaeSerratia fonticolaS. liquefaciensCitrobacter freundiiC. braakiiClostridium spp., Raoultella planticolaR. ornithinolyticaVibrio alginolyticusV. parahaemolyticusV. olivaceusAcinetobacter lowffiPlesiomonas shigelloidesPseudomonas putidaP. fluorescensAeromonas spp., Photobacterium damselaeP. phosphoreumP. leiognathiP. iliopiscariumP. kishitanii, and P. aquimaris. In this review, the role of these bacteria in histamine production in fish and seafood products with consequences for human food poisoning following consumption are discussed. In addition, methods to control their activity in countering histamine production are proposed. View Full-Text

Research – New bacteria in UK waters as temperatures rise – Vibrio’s

Science Daily

Food Illness

Rising temperatures are causing a “growing diversity” of Vibrio bacteria in the sea around the UK, new research shows.

The study, led by the University of Exeter, found two Vibrio species — Vibrio rotiferianus and Vibrio jasicida – that have never been recorded in UK waters before.

These species can harm sea creatures such as shellfish, but the increasing range of Vibrio species also raises concerns for human health.

Some Vibrio bacteria can cause gastroenteritis when eaten in raw or undercooked shellfish, and the bacteria can also cause skin infections.

The researchers say the spread of Vibrio species has resulted in a “worldwide surge” of Vibriosis infections in humans and aquatic animals.

Vibrio species can often be found in UK waters in summer, when temperatures are more favourable for them,” said Dr Sariqa Wagley, of the University of Exeter.

“With sea-surface temperatures rising due to climate change, Vibrio activity in the waters is more common, and the diversity of Vibrio species is now increasing.”

The study used Met Office data to identify locations where summer sea-surface temperatures were favourable for Vibrio bacteria (based on average number of days per year warmer than 18°C).

Researchers then analysed shellfish samples from four sites used by the shellfish industry — Chichester Harbour, Osea Island, Whitstable Bay and Lyme Bay.

“We found Vibrio parahaemolyticus — the leading cause of seafood-borne gastroenteritis worldwide — at Chichester Harbour,” Dr Wagley said.

Vibrio alginolyticus, which can also cause illness in humans, was identified at three of the sites that had sea-surface temperatures above 18°C (Chichester Harbour, Osea Island and Whitstable Bay).

“It is important to note that thorough cooking kills harmful Vibrio bacteria in seafood.

“However, increasing abundance and diversity of Vibrio bacteria creates health risks not only for people eating seafood, but for those using the sea for recreation purposes — either due to swallowing infected seawater or from the bacteria entering exposed wounds or cuts.

Vibrio bacteria are also a threat to a variety of marine species including shellfish themselves. Disease costs the global aquaculture industry £6 billion a year, and this burden of disease can be devastating.

“We have not seen mass mortality of shellfish due to Vibrio bacteria here in the UK yet, but this has occurred elsewhere — including in France and Australia.”

Dr Wagley added: “Our findings support the hypothesis that Vibrio-associated diseases are increasing and are influenced by the rise in sea-surface temperature.

“We need to monitor this situation closely, to protect human health, marine biodiversity and the seafood industry.”

Dr Joanne Preston, from the University of Portsmouth, said: “It is important to monitor the impact of increasing sea surface temperature on potential shellfish pathogens, not just for human health and safety, but also to understand the resilience of our coastal species and habitats to climate change.”

Dr Luke Helmer, from the Blue Marine Foundation and the University of Portsmouth, added: “The impacts of climate change on the marine environment are likely to be widespread.

“Understanding how these changes will affect ecologically and commercially important species and the people that rely on them will be crucial moving forward, in order to mitigate against them.”

The study — funded by Biotechnology and Biological Sciences Research Council (BBSRC) — was supported by Chichester and Havant Council and Sussex Inshore Fisheries and Conservation Authority.

Research – Editorial: Vibrio Species in the Food Processing Chain

Frontiers in Microbiology

Food Illness

Editorial on the Research Topic
Vibrio Species in the Food Processing Chain

Rising concern about the foodborne illnesses caused by pathogenic Vibrio species (mainly V. parahaemolyticus, V. cholera, and V. vulnificus) has led to a strengthening of research on the characterization of the presence of the genus in food matrices, virulence genes, pandemic markers, and the correlation between clinical and environmental isolates from different ecosystems. The emergence of antimicrobial resistance strains (AMR) in Vibrio spp. may produce a decrease in the effectiveness of commonly used antibiotics, thus posing a threat to public health. Progress in genomic studies has identified motile elements implied in gene transfer that may give birth to developing surveillance strategies for risk mitigation. The development of new infection models that can predict the pathogenesis of Vibrio spp. and the use of high-throughput sequencing techniques for serogroup genes may be useful tools for understanding molecular pathways and the infectivity of Vibrio spp. food isolates. In this Research Topic, different approaches, aiming at characterizing Vibrio spp. from aquaculture, marine, and vegetable ecosystems, together with the evaluation of microbial behavior and the development of new infection and serogroup models, are shown.

A mini-review by Dutta et al. discusses the role and antimicrobial resistance of pathogenic Vibrio spp. They present potential sources of antibiotic resistance genes for Vibrio spp., including the horizontal gene transmission from other pathogens as the main route. This has shown the genetic basis of the emergence of multidrug and extensively multidrug resistant Vibrio spp. through different types of highly mobile elements that can be extensively propagated among bacteria. The use of phage or probiotic therapies as alternative treatments for the inactivation of antibiotic resistant species of Vibrio may be helped by the maintenance of good hygiene practices and processing technologies to protect public health.

Antibiotic resistance genes can also originate from the environment, such as wastewater effluents or sediments in marine or aquaculture habitats. In this regard, Siddique et al. studied the characterization of pathogenic V. parahaemolyticus in a fish farm ecosystem (tilapia, rui, and shrimp). Among the 216 samples, 60.2% were positive for the pathogen, including 323 isolates of which 17 harboured the trh virulence gene gene. They confirm the presence of resistant strains to amoxicillin, ampicillin, and penicillin. Pathogenicity was further confirmed by the fluid accumulation in the ileal loop of rabbits being O8: KUT, the most predominant pathogenic serotype.

The presence and characterization of V. parahaemolyticus and V. vulnificus in marine and estuarine environments was studied by da Silva et al. They found 150 isolates of V. parahaemolyticus, including 52 positives for trh gene, and 129 of V. vulnificus from water and blue crab samples. PFGE and agglutination tests were used for molecular subtyping and determination of antibiotic resistance. The study showed the high presence of the O5 pathogenic serotype, together with the multidrug resistant isolates (41%) and the high genetic diversity of both Vibrio species, as no correlations were found among the sampling sites, antimicrobial resistance profiles, and pathogenicity.

The associated presence of Vibrio spp. in water ecosystems may underestimate their origin from other environmental and food sources. Ready-To-Eat vegetables can harbor pathogenic Vibrio spp. if poor manufacturing, hygiene, and storage practices are followed. Igbinosa et al. evaluated the presence of V. parahaemolyticus in minimally processed vegetables. Among the 63 isolates, they found microbial counts from 1.5 to 1,000 MPN/g and drug resistant isolates to ampicillin and cefotaxime mainly (>60%). They studied the biofilm formation finding that 23.8% of the isolates were strong biofilm producers. Regarding the presence of virulence genes, 100, 14.3, and 31.8% of the isolates harbored the toxR gene, trh, and tdh determinants, respectively.

The microbial behavior of Vibrio spp. can be quantified with predictive models. Posada-Izquierdo et al. investigated the fate of a Vibrio spp. cocktail inoculated in lye-treated table olives for 22 days. A predictive growth model was developed as a function of salt concentration (2–12%) and pH (4–9) using a synthetic medium and table olive brines. They found a higher effect of salt concentration than of pH for the growth inhibition of Vibrio spp. However, they were not able to proliferate in the table olives during fermentation, highlighting that phenolics compounds could exert a clear antimicrobial effect.

The disposal of reliable models to predict the pathogenesis of Vibrio spp. are increasingly needed since the use of virulence markers could not fully elucidate the presence of long-standing virulence indicators. This was demonstrated by Santos et al. using clinical and environmental V. parahaemolyticus isolates in two systemic infection models, namely mice and Galleria mellonella larvae. Interestingly, non-pathogenic environmental isolates produced lethal infections regardless of their source, serotype, and genotype (tdh, orf8, toxRSnew, and vpadF). A high correlation was found in the assayed models, supporting that G. mellonella larvae can be used as an alternative model to study the pathogenesis of V. parahaemolyticus.

Recently, the use of high-throughput sequencing technologies has aided researchers in deciphering the genome of different species. This was essential to provide complete knowledge of the molecular and metabolic pathways of microorganisms and the identification of virulence gene clusters. Bian et al. have developed VPsero, a rapid serotyping tool for V. parahaemolyticus using serogroup specific genes obtained from whole-genome sequencing data. The algorithm, based on the comparison of lipopolysaccharide and capsular polysaccharide gene clusters covered 43 K and 12 O serogroups. The authors showed the high sensitivity and specificity of the tool (>0.91), though limitations could be faced in future studies, such as the addition of new serogroups, the verification of the quality of assembled genomes and the availability of short reads.

This Research Topic presents a collection of manuscripts highlighting relevant findings in the pathogenesis of Vibrio spp. in the food chain and suggests future directions for research, enabling progress in the development of novel analytical methods and surveillance actions to mitigate the emerging risk posed by these human pathogens.

USA – The amount of coastal water that can harbor harmful Vibrio bacteria has spiked 56%. One species is flesh-eating.

Business Insider

KSWFOODWORLD

The amount of coastal water in which harmful bacteria can live has increased 56% over the past few decades, a report published Wednesday found.

That bacteria family, called Vibrio, lives in salty or brackish coastal waters, including in the US and Canada. The infection it causes, vibriosis, is usually contracted by eating raw or undercooked seafood or by exposing a wound to bacteria-infested seawater. Mild cases resolve in about three days, but Vibrio can also cause severe diseases, including gastroenteritis, life-threatening cholera, dangerous wound infections, and sepsis.

One species of Vibrio bacteria, Vibrio vulnificus, is referred to as flesh-eating because the bacteria can aggressively destroy body tissue. Those infections, though rare, often require intensive care or amputation. And they can be fatal, killing one in five infected people, usually within two days, according to the Centers for Disease Control and Prevention.

The reasons Vibrio is becoming a greater threat are that sea surface temperatures are rising and seawater is getting saltier. That’s one of many alarming findings from the medical journal The Lancet’s sixth annual report on health and climate change. In it, researchers from academia and the United Nations tracked 44 indicators of health effects linked to climate change.

Research – Heatwave-associated Vibrio infections in Germany, 2018 and 2019

Eurosurveillance

Food Illness

The genus , which belongs to the family  and the class , includes many species that are potential human pathogens [1].  is a highly diverse species that consists of more than 200 serogroups [2]. Strains within the serogroups O1 and O139 produce cholera toxin and are the causative agents of endemic and epidemic cholera, which represent an important cause of morbidity and mortality in countries with inadequate access to clean water and sanitation facilities [3].  strains not included in these serogroups as well as other  spp. are referred to as non-cholera  spp. and are ubiquitous aquatic bacteria with a worldwide distribution, especially in warm estuarine and marine ecosystems [2]. These halophilic bacteria prefer low to moderate salinity (less than 25 parts per thousand (ppt) NaCl) [4]. The abundance of  spp. in marine and estuarine waters closely corresponds with the sea surface temperatures (SSTs) since they proliferate in warm water [5]. Thus, regional variations in environmental conditions are paramount importance in understanding the ecology of  spp.

Human infections with non-cholera  spp. can manifest as wound infections, ear infections, gastroenteritis, and primary septicaemia and have been predominantly reported in tropical and subtropical regions [6]. In Europe, cases are rare, and infections associated with the Mediterranean Sea [79], the Atlantic Ocean [1012], or the Baltic Sea [13,14] have only been sporadically reported. However, a rapidly warming marine environment accompanied by an increase in extreme weather events such as heatwaves has resulted in unprecedented peak SSTs favouring the spread of  spp. worldwide. Recently, larger  spp. outbreaks have been reported in temperate regions such as Spain [15], Sweden, and Finland [16]. In Germany,  spp. other than toxigenic  strains were not classified as reportable pathogenic agents before March 2020; to date, only a few cases have been reported and few case series of autochthonous infections have been published [1720]. Over the last decades, resistance to various antibiotics, including to ampicillins, tetracyclines, and carbapenems, has emerged among  spp [21,22]. As a result of resistant isolates, the monitoring of antibiotic profiles of clinical and environmental  spp. has become of increasing importance. However, information on the number of human cases and the abundance of  spp. in coastal waters is scarce in most other European countries.

When we became aware of a high number of human infections with virulent  strains contracted in the Baltic Sea during the summer months of 2018 and 2019 (data not shown), we decided to conduct an observational retrospective multi-centre cohort study of domestically-acquired  infections. This study describes the epidemiology and the clinical impact of those infections and assesses antibiotic resistance patterns and phylogenetic relationships among clinical isolates. To determine the association between  infections and SST anomalies, we analysed the degree of warming in the south-western Baltic Sea, where the majority of the infections occurred.